Giulio, Pavesi: search on Z-Library

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1

Tissue-specific mtDNA abundance from exome data and its correlation with mitochondrial transcription, mass and respiratory activity

D'Erchia, Anna Maria, Atlante, Anna, Gadaleta, Gemma, Pavesi, Giulio, Chiara, Matteo, De Virgilio, Caterina, Manzari, Caterina, Mastropasqua, Francesca, Prazzoli, Gian Marco, Picardi, Ernesto, Gissi,

Journal:

Year:

2015

Language:

english

File:

PDF, 1.12 MB

english, 2015

2

Parallel simulation of reaction–diffusion phenomena in percolation processes: A model based on cellular automata

Stefania Bandini, Giancarlo Mauri, Giulio Pavesi, Carla Simone

Journal:

Future Generation Computer Systems

Year:

2001

Language:

english

File:

PDF, 195 KB

english, 2001

3

Hedgehogs, humans and high-school science. The benefits of involving high-school students in university research

Pavesi, Giulio, Siccardi, Antonio, Viale, Giovanna, Grazioli, Cinzia, Calciolari, Tiziana, Tenchini, Maria Luisa, Plevani, Paolo

Journal:

Year:

2008

Language:

english

File:

PDF, 206 KB

english, 2008

4

Detecting conserved coding genomic regions through signal processing of nucleotide substitution patterns

Matteo Ré, Giulio Pavesi

Journal:

Artificial Intelligence in Medicine

Year:

2009

Language:

english

File:

PDF, 419 KB

english, 2009

5

WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences

Giulio Pavesi, Federico Zambelli, Graziano Pesole

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 755 KB

english, 2007

6

MeCP2 post-translational modifications: a mechanism to control its involvement in synaptic plasticity and homeostasis?

Bellini, Elisa, Pavesi, Giulio, Barbiero, Isabella, Bergo, Anna, Chandola, Chetan, Nawaz, Mohammad S., Rusconi, Laura, Stefanelli, Gilda, Strollo, Marta, Valente, Maria M., Kilstrup-Nielsen, Charlotte

Journal:

Frontiers in Cellular Neuroscience

Year:

2014

Language:

english

File:

PDF, 1.98 MB

english, 2014

7

An acetylation-monoubiquitination switch on Lysine 120 of H2B

Gatta, Raffaella, Dolfini, Diletta, Zambelli, Federico, Imbriano, Carol, Pavesi, Giulio, Mantovani, Roberto

Journal:

Year:

2011

Language:

english

File:

PDF, 2.31 MB

english, 2011

8

A perspective of promoter architecture from the CCAAT box

Dolfini, Diletta, Zambelli, Federico, Pavesi, Giulio, Mantovani, Roberto

Journal:

Year:

2009

Language:

english

File:

PDF, 1.90 MB

english, 2009

9

Interspecific analysis of the glycosidases of the sperm plasma membrane in Drosophila

Jari Intra, Federica Cenni, Giulio Pavesi, Maria Pasini, Maria-Elisa Perotti

Journal:

Molecular Reproduction and Development

Year:

2009

Language:

english

File:

PDF, 700 KB

english, 2009

10

Controlled generation of two-dimensional patterns based on Stochastic Cellular Automata

Stefania Bandini, Giulio Pavesi

Journal:

Future Generation Computer Systems

Year:

2002

Language:

english

File:

PDF, 153 KB

english, 2002

11

Microtubules play a role in trafficking prevacuolar compartments to vacuoles in tobacco pollen tubes

Onelli, Elisabetta, Scali, Monica, Caccianiga, Marco, Stroppa, Nadia, Morandini, Piero, Pavesi, Giulio, Moscatelli, Alessandra

Journal:

Year:

2018

Language:

english

File:

PDF, 4.21 MB

english, 2018

12

Gene trap lines identify Arabidopsis genes expressed in stomatal guard cells

Massimo Galbiati, Laura Simoni, Giulio Pavesi, Eleonora Cominelli, Priscilla Francia, Alain Vavasseur, Timothy Nelson, Michael Bevan, Chiara Tonelli

Journal:

The Plant Journal

Year:

2008

Language:

english

File:

PDF, 557 KB

english, 2008

13

[IEEE 2013 International Joint Conference on Neural Networks (IJCNN 2013 - Dallas) - Dallas, TX, USA (2013.08.4-2013.08.9)] The 2013 International Joint Conference on Neural Networks (IJCNN) - A neural network based algorithm for gene expression prediction from chromatin structure

Frasca, Marco, Pavesi, Giulio

Year:

2013

Language:

english

File:

PDF, 286 KB

english, 2013

14

The Short Isoform of NF-YA Belongs to the Embryonic Stem Cell Transcription Factor Circuitry

Dolfini, Diletta, Minuzzo, Mario, Pavesi, Giulio, Mantovani, Roberto

Journal:

Year:

2012

Language:

english

File:

PDF, 765 KB

english, 2012

15

miR-17-92 fine-tunes MYC expression and function to ensure optimal B cell lymphoma growth

Mihailovich, Marija, Bremang, Michael, Spadotto, Valeria, Musiani, Daniele, Vitale, Elena, Varano, Gabriele, Zambelli, Federico, Mancuso, Francesco M., Cairns, David A., Pavesi, Giulio, Casola, Stefan

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 2.06 MB

english, 2015

16

A high definition look at the NF-Y regulome reveals genome-wide associations with selected transcription factors

Dolfini, Diletta, Zambelli, Federico, Pedrazzoli, Maurizio, Mantovani, Roberto, Pavesi, Giulio

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 5.59 MB

english, 2016

17

Erratum: SWIM: a computational tool to unveiling crucial nodes in complex biological networks

Paci, Paola, Colombo, Teresa, Fiscon, Giulia, Gurtner, Aymone, Pavesi, Giulio, Farina, Lorenzo

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 344 KB

english, 2017

18

Algorithms for pattern matching and discovery in RNA secondary structure

Giancarlo Mauri, Giulio Pavesi

Journal:

Theoretical Computer Science

Year:

2005

Language:

english

File:

PDF, 331 KB

english, 2005

19

Beyond evolutionary trees

Gianluca Della Vedova, Riccardo Dondi, Tao Jiang, Giulio Pavesi, Yuri Pirola, Lusheng Wang

Journal:

Natural Computing

Year:

2010

Language:

english

File:

PDF, 339 KB

english, 2010

20

Phylogenetic analyses suggest multiple changes of substrate specificity within the Glycosyl hydrolase 20 family

Jari Intra, Giulio Pavesi, David S Horner

Journal:

BMC Evolutionary Biology

Year:

2008

Language:

english

File:

PDF, 1.60 MB

english, 2008

21

[Advances in Biochemical Engineering/Biotechnology] || ChIP-Seq Data Analysis to Define Transcriptional Regulatory Networks

Year:

2016

Language:

english

File:

PDF, 308 KB

english, 2016

22

SWIM: a computational tool to unveiling crucial nodes in complex biological networks

Paci, Paola, Colombo, Teresa, Fiscon, Giulia, Gurtner, Aymone, Pavesi, Giulio, Farina, Lorenzo

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.64 MB

english, 2017

23

Classification of co-expressed genes from DNA regulatory regions

Giulio Pavesi, Giorgio Valentini

Journal:

Information Fusion

Year:

2009

Language:

english

File:

PDF, 383 KB

english, 2009

24

RNentropy: an entropy-based tool for the detection of significant variation of gene expression across multiple RNA-Seq experiments

Zambelli, Federico, Mastropasqua, Francesca, Picardi, Ernesto, D’Erchia, Anna Maria, Pesole, Graziano, Pavesi, Giulio

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 2.58 MB

english, 2018

25

Evaluation of Quality Assessment Protocols for High Throughput Genome Resequencing Data

Chiara, Matteo, Pavesi, Giulio

Journal:

Frontiers in Genetics

Year:

2017

Language:

english

File:

PDF, 1.45 MB

english, 2017

26

Zebrafish as a Model to Investigate Dynamin 2-Related Diseases

Bragato, Cinzia, Gaudenzi, Germano, Blasevich, Flavia, Pavesi, Giulio, Maggi, Lorenzo, Giunta, Michele, Cotelli, Franco, Mora, Marina

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.83 MB

english, 2016

27

Expression study of an α-l-fucosidase gene in the Drosophilidae family

Maria E. Pasini, Jari Intra, Giulio Pavesi

Journal:

Year:

2008

Language:

english

File:

PDF, 1.14 MB

english, 2008

28

Genomic Organization and Evolutionary Conservation of Plant D-Type Cyclins

Margit Menges, Giulio Pavesi, Piero Morandini, Laszlo Bögre and James A. H. Murray

Journal:

PLANT PHYSIOLOGY

Year:

2007

Language:

english

File:

PDF, 3.37 MB

english, 2007

29

Integrating Peak Colocalization and Motif Enrichment Analysis for the Discovery of Genome-Wide Regulatory Modules and Transcription Factor Recruitment Rules

Ronzio, Mirko, Zambelli, Federico, Dolfini, Diletta, Mantovani, Roberto, Pavesi, Giulio

Journal:

Frontiers in Genetics

Year:

2020

File:

PDF, 2.29 MB

2020

30

Assessment of orthologous splicing isoforms in human and mouse orthologous genes

Federico Zambelli, Giulio Pavesi, Carmela Gissi, David S Horner, Graziano Pesole

Journal:

Year:

2010

Language:

english

File:

PDF, 1.05 MB

english, 2010

31

WHEN GENES ARE NOT ENOUGH: GENOMICS AND EPIGENOMICS

Journal:

Istituto Lombardo - Accademia di Scienze e Lettere - Rendiconti di Scienze

Year:

2013

File:

PDF, 151 KB

2013

32

Genome wide features, distribution and correlations of NF-Y binding sites

Zambelli, Federico, Pavesi, Giulio

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

Year:

2016

Language:

english

File:

PDF, 843 KB

english, 2016

33

A parallel algorithm for pattern discovery in biological sequences

Giancarlo Mauri, Giulio Pavesi

Journal:

Future Generation Computer Systems

Year:

2002

Language:

english

File:

PDF, 90 KB

english, 2002

34

On-line construction of compact directed acyclic word graphs

Shunsuke Inenaga, Hiromasa Hoshino, Ayumi Shinohara, Masayuki Takeda, Setsuo Arikawa, Giancarlo Mauri, Giulio Pavesi

Journal:

Discrete Applied Mathematics

Year:

2005

Language:

english

File:

PDF, 561 KB

english, 2005

35

Chromatin proteomics reveals novel combinatorial histone modification signatures that mark distinct subpopulations of macrophage enhancers

Soldi, Monica, Mari, Tommaso, Nicosia, Luciano, Musiani, Daniele, Sigismondo, Gianluca, Cuomo, Alessandro, Pavesi, Giulio, Bonaldi, Tiziana

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 1.25 MB

english, 2017

36

Trans-Reactivation: A New Epigenetic Phenomenon Underlying Transcriptional Reactivation of Silenced Genes

Onorati, Maria Cristina, Arancio, Walter, Cavalieri, Vincenzo, Ingrassia, Antonia M. R., Pavesi, Giulio, Corona, Davide F. V., Pirrotta, Vincenzo

Journal:

Year:

2015

Language:

english

File:

PDF, 5.61 MB

english, 2015

37

Histone acetylation landscape in S. cerevisiae nhp6ab mutants reflects altered glucose metabolism

Diletta, Durano, Francesca, Di Felice, Federica, Caldarelli, Andrea, Lukacs, D'Alfonso, Anna, Michele, Saliola, Fabio, Sciubba, Alfredo, Miccheli, Federico, Zambelli, Giulio, Pavesi, Emilio, Bianchi M

Journal:

Biochimica et Biophysica Acta (BBA) - General Subjects

Year:

2020

Language:

english

File:

PDF, 4.84 MB

english, 2020

38

An algorithm for finding conserved secondary structure motifs in unaligned RNA sequences

Giulio Pavesi, Giancarlo Mauri, Graziano Pesole

Journal:

Journal of Computer Science and Technology

Year:

2004

Language:

english

File:

PDF, 1.12 MB

english, 2004

39

Comparative and phylogenetic analysis of α-l-fucosidase genes

Jari Intra, Maria-Elisa Perotti, Giulio Pavesi, David Horner

Journal:

Year:

2007

Language:

english

File:

PDF, 1.30 MB

english, 2007

40

Epigenetic signatures of stress adaptation and flowering regulation in response to extended drought and recovery in Zea mays

Forestan, Cristian, Farinati, Silvia, Zambelli, Federico, Pavesi, Giulio, Rossi, Vincenzo, Varotto, Serena

Journal:

Plant, Cell & Environment

Year:

2019

Language:

english

File:

PDF, 3.78 MB

english, 2019

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